Skip to main content

Table 1 The primer sequence used to amplify the exonic sequence variants in the bovine FTO gene

From: Novel SNP in the coding region of the FTO gene is associated with marbling score in Hanwoo (Korean cattle)

Primer

Primer sequences (5′-3′)

Amplified region

Fragment size (bp)

Location

GenBank accession no.

FTO-1

F-GGCTATAACGGCAGCATGAA

exon 1

844

4 ~ 847

AC_000175.1

R-CCAGGTGGTGAAGATGGAAA

FTO-2

F-AAGGCATTGTCAGCCTGGATG

exon 2

714

107821 ~ 108536

R-ATATGGTACAAGGAGCACCAGG

FTO-3

F-TGTCTGTAATGGAGCTTGGACC

exon 3

906

124883 ~ 125788

R-CAATCATATCTCCAGAGCCTGC

FTO-4

F-CCTTTGCAACTCTCTAGTCCTGTG

exon 4

1064

144220 ~ 145283

R-CTCTCCAAACTCCCCAAACTTC

FTO-5

F-TTTCCAGGCAAGAGTACTGGAG

exon 5

675

166054 ~ 166728

R-CTTGACCTTGACCTTGACCTTG

FTO-6

F-AACGTGGGGTTCACTTACTGTG

exon 6

651

175553 ~ 176203

R-GCAAGAATACTGGAGTGGGTTG

FTO-7

F-CTGTCATGTGCTTTAGGATCTC

exon 7

617

183602 ~ 184218

R-TGTCTGTGAGTCAACTTCTGTT

FTO-8

F-TAAGGCAGTGGAGCTTTGGA

exon 8

821

235720 ~ 236540

R-TGTGCACAGAAATGAGGCTG

FTO-9

F-TCACAGTGGATTGCCAAGGT

exon 9

824

420877 ~ 421700

R-TGTGGCTCATGCAACTGAAG