In silico characterisation, homology modelling and structure-based functional annotation of blunt snout bream (Megalobrama amblycephala) Hsp70 and Hsc70 proteins

Table 6 Enzyme Commission (EC) predictions for Ma-Hsp70 and Ma-Hsc70 proteins

	Csc^EC	PDB ID	TM-sc	RMSD^a	IDEN^a	Cov	EC No.	EC Name
Ma-Hsp70	0.241	3cjc-A	0.421	4.08	0.137	0.493	3.1.21.1	Deoxyribonuclease I
	0.230	1qha-A	0.405	5.2	0.08	0.509	2.7.1.1	Hexokinase
	0.222	3f9m-A	0.386	4.08	0.099	0.457	2.7.1.2	Glucokinase
	0.221	3hm8-A	0.381	4.25	0.106	0.456	2.7.1.1	Hexokinase
	0.221	2e2o-A	0.362	3.8	0.103	0.417	2.7.1.1	Hexokinase
Ma-Hsc70	0.221	1qha-A	0.390	5.27	0.089	0.491	2.7.1.1	Hexokinase
	0.216	3hm8-A	0.378	4.12	0.111	0.447	2.7.1.1	Hexokinase
	0.215	3f9m-A	0.382	4.08	0.110	0.452	2.7.1.2	Glucokinase
	0.185	1v4t-A	0.281	4.95	0.064	0.347	2.7.1.2 2.7.1.1	Glucokinase Hexokinase
	0.168	3cjc-A	0.411	4.13	0.131	0.484	3.1.21.1	Deoxyribonuclease I

Cscore^EC is the confidence score for the enzyme commission number (EC No.) prediction (0–1), TM-sc is the TM-score, Cov represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by length of the query protein. See Table 4 for other term explanations

ISSN: 2055-0391