Journal of Animal Science and Technology

Table 2 Average r² between adjacent SNPs obtained for each autosomal chromosome in seven Iranian cattle breeds

From: Comparison of linkage disequilibrium levels in Iranian indigenous cattle using whole genome SNPs data

Autosomal chromosome	Breed
Autosomal chromosome	Sistani	Kermani	Najdi	Taleshi	Mazandarani	Kurdi	Sarabi
1	0.387	0.387	0.367	0.327	0.349	0.304	0.371
2	0.383	0.452	0.407	0.357	0.373	0.349	0.350
3	0.402	0.365	0.361	0.387	0.358	0.316	0.364
4	0.386	0.409	0.382	0.316	0.355	0.311	0.345
5	0.456	0.431	0.366	0.332	0.361	0.323	0.374
6	0.402	0.367	0.375	0.355	0.366	0.337	0.372
7	0.405	0.403	0.393	0.369	0.347	0.358	0.337
8	0.409	0.338	0.401	0.322	0.355	0.317	0.345
9	0.423	0.367	0.370	0.329	0.355	0.328	0.356
10	0.391	0.409	0.376	0.353	0.369	0.323	0.373
11	0.402	0.365	0.382	0.390	0.371	0.355	0.385
12	0.415	0.418	0.376	0.313	0.331	0.313	0.351
13	0.385	0.361	0.366	0.332	0.346	0.320	0.315
14	0.378	0.378	0.384	0.324	0.403	0.332	0.354
15	0.385	0.389	0.375	0.334	0.371	0.290	0.365
16	0.401	0.372	0.394	0.336	0.388	0.326	0.38
17	0.412	0.390	0.353	0.308	0.332	0.288	0.36
18	0.441	0.377	0.367	0.328	0.361	0.325	0.369
19	0.416	0.447	0.373	0.336	0.367	0.305	0.366
20	0.360	0.376	0.408	0.332	0.361	0.325	0.341
21	0.374	0.390	0.374	0.318	0.355	0.347	0.366
22	0.367	0.416	0.367	0.382	0.378	0.332	0.331
23	0.324	0.414	0.335	0.350	0.310	0.323	0.314
24	0.398	0.408	0.373	0.321	0.365	0.323	0.32
25	0.386	0.377	0.385	0.324	0.383	0.281	0.42
26	0.385	0.382	0.354	0.362	0.372	0.380	0.385
27	0.369	0.354	0.373	0.303	0.348	0.287	0.342
28	0.385	0.384	0.4	0.301	0.363	0.294	0.348
29	0.377	0.312	0.343	0.321	0.321	0.287	0.312
Average	0.393	0.388	0.375	0.337	0.359	0.321	0.355

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ISSN: 2055-0391

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