Skip to main content

Table 2 Average imputation runtime on four datasets (seconds)

From: Comparison of three boosting methods in parent-offspring trios for genotype imputation using simulation study

Data set

Sample size

Density

Version

AB

LB

TB

G1

100

5 K

NA90

2930

3055

6975

G2

100

10 K

NA90

6511

6788

13956

G3

500

5 K

NA90

3460

3665

10221

G4

500

10 K

NA90

7601

7802

23521

  1. NA90: 90 % of genotype is missing per offspring
  2. AB AdaBoost, LB LogitBoost, TB TotalBoost
Back to article page

Journal of Animal Science and Technology

ISSN: 2055-0391